SpiderParameter.cpp File Reference

#include "SpiderParameter.hpp"
#include "constant_strings.hpp"
#include "dbgPrintHelper.hpp"
#include "fileIO.hpp"
#include "string_manipulation.hpp"
#include "translator.hpp"
#include "utility.hpp"
#include "config_HAVE_TECHNOLOGY_BUILT.hpp"
#include "config_RELEASE.hpp"
#include <getopt.h>
#include <string>
#include <vector>

Include dependency graph for SpiderParameter.cpp:

Go to the source code of this file.

Macros
#define	INPUT_OPT_ACCURACY   256
	PARAMETERS STUFF ***********************///. More...
#define	INPUT_OPT_BENCHMARK_BOUNDS   (1 + INPUT_OPT_ACCURACY)
#define	INPUT_OPT_COMPONENTS   (1 + INPUT_OPT_BENCHMARK_BOUNDS)
#define	INPUT_OPT_CROSS_VALIDATION   (1 + INPUT_OPT_COMPONENTS)
#define	INPUT_OPT_MINIMUM_SIGNIFICANCE   (1 + INPUT_OPT_CROSS_VALIDATION)
#define	INPUT_OPT_NORMALIZATION_SEQUENCES   (1 + INPUT_OPT_MINIMUM_SIGNIFICANCE)
#define	INPUT_OPT_NORMALIZATION_WEIGHT_FILE   (1 + INPUT_OPT_NORMALIZATION_SEQUENCES)
#define	INPUT_OPT_PREDICTION_INTERVAL_VALUE   (1 + INPUT_OPT_NORMALIZATION_WEIGHT_FILE)
#define	INPUT_OPT_SEQUENCE_LENGTH   (1 + INPUT_OPT_PREDICTION_INTERVAL_VALUE)
#define	INPUT_OPT_SURVIVING_BENCHMARKS   (1 + INPUT_OPT_SEQUENCE_LENGTH)
#define	TOOL_OPT_BASE   (1 + INPUT_OPT_SURVIVING_BENCHMARKS)

Detailed Description

Author

Marco Lattuada lattu.nosp@m.ada@.nosp@m.elet..nosp@m.poli.nosp@m.mi.it $Revision$ $Date$ Last modified by $Author$

Definition in file SpiderParameter.cpp.

Macro Definition Documentation

INPUT_OPT_ACCURACY

#define INPUT_OPT_ACCURACY   256

PARAMETERS STUFF ***********************///.

Definition at line 60 of file SpiderParameter.cpp.

Referenced by SpiderParameter::Exec().

INPUT_OPT_BENCHMARK_BOUNDS

#define INPUT_OPT_BENCHMARK_BOUNDS   (1 + INPUT_OPT_ACCURACY)

Definition at line 61 of file SpiderParameter.cpp.

Referenced by SpiderParameter::Exec().

INPUT_OPT_COMPONENTS

#define INPUT_OPT_COMPONENTS   (1 + INPUT_OPT_BENCHMARK_BOUNDS)

Definition at line 62 of file SpiderParameter.cpp.

Referenced by SpiderParameter::Exec().

INPUT_OPT_CROSS_VALIDATION

#define INPUT_OPT_CROSS_VALIDATION   (1 + INPUT_OPT_COMPONENTS)

Definition at line 63 of file SpiderParameter.cpp.

Referenced by SpiderParameter::Exec().

INPUT_OPT_MINIMUM_SIGNIFICANCE

#define INPUT_OPT_MINIMUM_SIGNIFICANCE   (1 + INPUT_OPT_CROSS_VALIDATION)

Definition at line 64 of file SpiderParameter.cpp.

INPUT_OPT_NORMALIZATION_SEQUENCES

#define INPUT_OPT_NORMALIZATION_SEQUENCES   (1 + INPUT_OPT_MINIMUM_SIGNIFICANCE)

Definition at line 65 of file SpiderParameter.cpp.

Referenced by SpiderParameter::Exec().

INPUT_OPT_NORMALIZATION_WEIGHT_FILE

#define INPUT_OPT_NORMALIZATION_WEIGHT_FILE   (1 + INPUT_OPT_NORMALIZATION_SEQUENCES)

Definition at line 66 of file SpiderParameter.cpp.

Referenced by SpiderParameter::Exec().

INPUT_OPT_PREDICTION_INTERVAL_VALUE

#define INPUT_OPT_PREDICTION_INTERVAL_VALUE   (1 + INPUT_OPT_NORMALIZATION_WEIGHT_FILE)

Definition at line 67 of file SpiderParameter.cpp.

Referenced by SpiderParameter::Exec().

INPUT_OPT_SEQUENCE_LENGTH

#define INPUT_OPT_SEQUENCE_LENGTH   (1 + INPUT_OPT_PREDICTION_INTERVAL_VALUE)

Definition at line 68 of file SpiderParameter.cpp.

Referenced by SpiderParameter::Exec().

INPUT_OPT_SURVIVING_BENCHMARKS

#define INPUT_OPT_SURVIVING_BENCHMARKS   (1 + INPUT_OPT_SEQUENCE_LENGTH)

Definition at line 69 of file SpiderParameter.cpp.

Referenced by SpiderParameter::Exec().

TOOL_OPT_BASE

#define TOOL_OPT_BASE   (1 + INPUT_OPT_SURVIVING_BENCHMARKS)

Definition at line 70 of file SpiderParameter.cpp.