nussinov.c File Reference

#include <stdio.h>
#include <unistd.h>
#include <string.h>
#include <math.h>
#include <polybench.h>
#include "nussinov.h"

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Macros
#define	match(b1, b2)   (((b1)+(b2)) == 3 ? 1 : 0)
#define	max_score(s1, s2)   ((s1 >= s2) ? s1 : s2)

Typedefs
typedef char	base
	This version is stamped on May 10, 2016. More...

Functions
static void	init_array (int n, base POLYBENCH_1D(seq, N, n), DATA_TYPE POLYBENCH_2D(table, N, N, n, n))
static void	print_array (int n, DATA_TYPE POLYBENCH_2D(table, N, N, n, n))
	__attribute__ ((noinline))
	Convert the given fixedpt number to a decimal string. More...
int	main (int argc, char **argv)

Macro Definition Documentation

match

#define match	(		b1,
			b2
	)		(((b1)+(b2)) == 3 ? 1 : 0)

Definition at line 26 of file nussinov.c.

Referenced by __attribute__().

max_score

#define max_score	(		s1,
			s2
	)		((s1 >= s2) ? s1 : s2)

Definition at line 27 of file nussinov.c.

Referenced by __attribute__().

Typedef Documentation

base

typedef char base

This version is stamped on May 10, 2016.

Contact: Louis-Noel Pouchet <pouchet.ohio-state.edu> Tomofumi Yuki <tomofumi.yuki.fr>

Web address: http://polybench.sourceforge.net

Definition at line 24 of file nussinov.c.

Function Documentation

__attribute__()

__attribute__

(

(noinline)

)

Convert the given fixedpt number to a decimal string.

The max_dec argument specifies how many decimal digits to the right of the decimal point to generate. If set to -1, the "default" number of decimal digits will be used (2 for 32-bit fixedpt width, 10 for 64-bit fixedpt width); If set to -2, "all" of the digits will be returned, meaning there will be invalid, bogus digits outside the specified precisions.

Definition at line 79 of file nussinov.c.

References _PB_N, k, match, max_score, seq, and test_panda::table.

init_array()

static void init_array ( int  n, base   POLYBENCH_1Dseq, N, n, DATA_TYPE   POLYBENCH_2Dtable, N, N, n, n  )

static

Definition at line 31 of file nussinov.c.

References seq, and test_panda::table.

Referenced by main().

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main()

int main	(	int	argc,
		char **	argv
	)

Definition at line 112 of file nussinov.c.

References DATA_TYPE, init_array(), N, POLYBENCH_1D_ARRAY_DECL, POLYBENCH_2D_ARRAY_DECL, POLYBENCH_ARRAY, POLYBENCH_FREE_ARRAY, polybench_prevent_dce, polybench_print_instruments, polybench_start_instruments, polybench_stop_instruments, print_array(), seq, and test_panda::table.

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print_array()

static void print_array ( int  n, DATA_TYPE   POLYBENCH_2Dtable, N, N, n, n  )

static

Definition at line 51 of file nussinov.c.

References DATA_PRINTF_MODIFIER, POLYBENCH_DUMP_BEGIN, POLYBENCH_DUMP_END, POLYBENCH_DUMP_FINISH, POLYBENCH_DUMP_START, POLYBENCH_DUMP_TARGET, and test_panda::table.

Referenced by main().

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